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Structures

Structures obtained by X-ray crystallography, NMR spectroscopy, computational methods.

X-ray crystallography structures

Name
Description Download
ARC-N        
ARC-NΔcc (78-227) from Rhodococcus erythropolis
2WFW.pdb
PAN-N
Proteasome-activating nucleotidase (PAN) N-domain (57-134) from Archaeoglobus
fulgidus fused to GCN4
2WG5.pdb
PAN-N (P61A)
Proteasome-activating nucleotidase (PAN) N-domain (57-134) from Archaeoglobus
fulgidus fused to GCN4, P61 A mutant
2WG6.pdb
SpoVT-FL        
Crystal Structure of B. Subtilis SpoVT 2W1T.pdb
SpoVT-CT
domain
Crystal Structure of the C-Terminal Domain of B. Subtilis SpoVT 2W1R.pdb
BadA
Structure of two domains of the head of the Bartonella adhesin BadA 3D9X.pdb
Mj0056
Riboflavin Kinase Mj0056 from Methanocaldococcus Jannaschii in Complex with PO4      
2VBS.pdb
Mj0056 Riboflavin Kinase Mj0056 from Methanocaldococcus Jannaschii in Complex with CDP
and PO4
2VBT.pdb
Mj0056 Riboflavin Kinase Mj0056 from Methanocaldococcus Jannaschii in Complex with CDP 2VBU.pdb
Mj0056 Riboflavin Kinase Mj0056 from Methanocaldococcus Jannaschii in Complex with CDP
and FMN
2VBV.pdb


NMR structures

Name Description Download
Mj0056           
Solution structure of Mj0056 2P3M.pdb
HAMP The solution structure of the HAMP domain of the hypothetical transmembrane  
receptor Af1503 (mean structure)
2ASW.pdb
HAMP The solution structure of the HAMP domain of the hypothetical transmembrane
receptor Af1503 (22 models)
2ASX.pdb
PhS018
The solution structure of PHS018 from Pyrococcus horikoshii (22 models) 2GLW.pdb
AbrB
The Solution Structure Of The N-Domain Of The Transcription Factor AbrB (22 models)  
1YSF.pdb
AbrB
The Solution Structure Of The N-Domain Of The Transcription Factor AbrB (mean
structure)
1YFB.pdb


Computational models

Name Description                                                                                                                    
Download
Plasmodium
Hsp101
Hexameric model of plasmodium Hsp101 assembled from monomers modeled by
homology to 1QVR.
PfClpB-6mer.pdb
Thermus ClpB Hexameric model of Thermus thermophilus ClpB based on the monomeric structure
1QVR.
ClpB_mod.pdb
Apoptosome  
Ring model of the apoptosome. The monomer of Apaf-1 (1Z6T) was modeled as
a heptameric ring structure and placed in the center of the domain model by C.
Akey and coworkers (PubMed).
Apoptosome_mod.pdb
BadA Model structure of the full head of the BadA fiber BadA_headmod.pdb
YadA
New model structure of the full YadA fiber YadA_mod_v2.pdb
YadA Old model structure of the full YadA fiber YadA_mod.pdb
OmpW Model structure of the outer membrane beta barrel protein OmpW OmpW_mod.pdb


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last modified 2009-11-11