Software

 Title Description Download
 AlnEdit Alignment editor (Fasta, Clustal, Stockholm, Phylip, Treecon format)  FTP
 BLATview Graphical display of BLAT results  FTP
 CLANS Graph layout of protein sequence pairwise similarities in 2D or 3D FTP
 HH-suite Sensitive sequence searching by HMM-HMM comparision  FTP
 JTreeview Tree viewer (Newick format) FTP
 PHAT Phylome analysis tool (part of PhyloGenie) FTP
 PhyloGenie Phylome generation and analysis tool FTP